Literature-derived regulatory evidence
This dataset contains literature-derived regulatory records with annotated original-sentence Evidence and a detailed Comment describing the extracted regulatory relationship.
Release V26.7.2
Field definitions and file descriptions are provided in the Downloads section of the User Guide. The literature-derived dataset contains records with annotated original-sentence Evidence and Comments. The complete dataset additionally contains records integrated from external databases.
These are the most detailed PhosphoLink files. Each row represents one regulatory evidence record and includes kinase, phosphatase, or regulator, substrate, site, source, and mapping fields.
This dataset contains literature-derived regulatory records with annotated original-sentence Evidence and a detailed Comment describing the extracted regulatory relationship.
This dataset contains all PhosphoLink regulatory evidence records, including literature-derived records and records integrated from external databases.
Use these files when you do not need one row per evidence record. Each file summarizes the complete PhosphoLink database from a different biological perspective.
One row per protein, with UniProt ID, displayed name, regulatory role, kinase or phosphatase family, and organism. Useful for protein lists, identifier mapping, and role-based analyses.
One row per family, with family type and member UniProt IDs. Useful for family-level enrichment, grouping, and regulator-family comparisons.
One summarized regulatory relationship per row, with reaction type, sites, supporting literature, and annotation score. Useful for pair-level analysis without duplicate evidence records.
One row per supporting publication, with PMID, year, title, and associated regulatory relationships. Useful for literature collections, publication trends, and source tracking.
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